Refactor workspace structure and documentation

- Deleted obsolete files: obsidian-vault.md, onboarding.md, workspace-model.md
- Updated opencode.json to remove references to deleted files.
- Revised profile.md to clarify the status of legacy paths and communication evidence.
- Adjusted prompts to reflect new file paths and improve clarity.
- Enhanced daily logs with focus, work-items, and blockers properties.
- Updated work-item notes to include systems, workstreams, people, and related properties.
- Improved context maintenance guidelines to ensure accurate and durable project knowledge.
- Refined base filters to exclude template files and ensure only relevant notes are displayed.
- Updated daily templates to ensure proper formatting and consistency.
- Modified workflows to align with the new vault structure and improve context synchronization.

.opencode/commands/standup.md

@@ -11,7 +11,6 @@ First, refresh Mattermost context before drafting:
 Read:
 
 @prompts/standup.md
-@ai/AGENTS.md
 @vault/00-start/start-here.md
 @vault/01-current/current-work.md
 @vault/01-current/work-items.md
@@ -21,18 +20,6 @@ Read:
 @vault/03-context/process/communication.md
 @vault/03-context/process/jira-story-rules.md
 @vault/04-people/manager.md
-@ai/context/index.md
-@ai/context/project.md
-@ai/context/workstreams/index.md
-@ai/context/workstreams/flow-page-references.md
-@ai/context/process/communication.md
-@ai/context/process/jira-story-rules.md
-@ai/context/people/manager.md
-@ai/work-items/index.md
-@ai/state/current.md
-@ai/state/work-items.md
-@knowledge/communication-rules.md
-@knowledge/agent-memory-rules.md
 
 Previous workday Mattermost context, if present:
 
@@ -40,7 +27,7 @@ Previous workday Mattermost context, if present:
 
 Today's log, if present:
 
-!`if [ -f vault/06-daily/$(date +%F).md ]; then cat vault/06-daily/$(date +%F).md; elif [ -f ai/logs/$(date +%F).md ]; then cat ai/logs/$(date +%F).md; else echo "No daily note exists for today yet."; fi`
+!`if [ -f vault/06-daily/$(date +%F).md ]; then cat vault/06-daily/$(date +%F).md; else echo "No daily note exists for today yet."; fi`
 
 Latest Mattermost context, preferring inbox and falling back to generated JSONL:
 
@@ -48,7 +35,7 @@ Latest Mattermost context, preferring inbox and falling back to generated JSONL:
 
 Detailed active work item files, if available:
 
-!`if [ -d vault/02-work-items ]; then for f in vault/02-work-items/*.md; do case "$f" in *README.md|*index.md) continue;; esac; echo "\n### $f"; cat "$f"; done; elif [ -d ai/work-items ]; then for f in ai/work-items/*.md; do case "$f" in *README.md|*index.md) continue;; esac; echo "\n### $f"; cat "$f"; done; else echo "No work item files available."; fi`
+!`if [ -d vault/02-work-items ]; then for f in vault/02-work-items/*.md; do case "$f" in *README.md|*index.md) continue;; esac; echo "\n### $f"; cat "$f"; done; else echo "No work item files available."; fi`
 
 Before drafting:
 
@@ -61,7 +48,7 @@ Before drafting:
 - if documentation or root cause updates directly support a story, roll them into that story's update instead of listing them separately
 - exclude items that are not directly tied to a story unless they are true blockers
 - when one Jira item has multiple concrete updates, group them under one top-level `JIRA-ID - Title` bullet with indented markdown sub-bullets instead of repeating the same Jira line
-- use `vault/03-context/workstreams/flow-page-references.md` to preserve real flow/page identifiers when shorthand appears in logs or messages, falling back to `ai/context/workstreams/flow-page-references.md` only if needed
+- use `vault/03-context/workstreams/flow-page-references.md` to preserve real flow/page identifiers when shorthand appears in logs or messages
 
 Return a standup that is: